Index A | C | D | E | F | G | I | L | M | N | O | P | Q | R | S | T | X A adjust_bulk_Fe2O3() (peridoxia.data_structures.PhaseDictionaries method) aFe3O4 (peridoxia.data_structures.Spinel property) (peridoxia.main.SpinelHistory property) agg_liq (peridoxia.main.ModelRun property) Al_per_6_O (peridoxia.data_structures.Clinopyroxene property) (peridoxia.data_structures.Orthopyroxene property) (peridoxia.main.ClinopyroxeneHistory property) (peridoxia.main.OrthopyroxeneHistory property) Assemblage (class in peridoxia.data_structures) C Ca_mass_ratio (peridoxia.data_structures.Garnet property) (peridoxia.main.GarnetHistory property) Clinopyroxene (class in peridoxia.data_structures) ClinopyroxeneHistory (class in peridoxia.main) color (peridoxia.main.ModelRun property) cpx (peridoxia.main.ModelRun property) Cr_num (peridoxia.data_structures.Phase property) (peridoxia.main.PhaseHistory property) create_assemblage() (peridoxia.data_structures.PhaseDictionaries method) create_extensive_endmember_array() (peridoxia.data_structures.PhaseDictionaries method) D display_output() (peridoxia.data_structures.Assemblage method) (peridoxia.data_structures.PhaseDictionaries method) E endmember_names (peridoxia.data_structures.Assemblage property) ext_end_mol (peridoxia.main.PhaseHistory property) extensive_endmember_array (peridoxia.data_structures.Phase property) F Fe3_Al (peridoxia.data_structures.Phase property) (peridoxia.main.PhaseHistory property) Fe3_tFe (peridoxia.data_structures.Phase property) (peridoxia.main.PhaseHistory property) FFM (peridoxia.data_structures.Assemblage property) (peridoxia.main.ModelRun property) fO2_Borisov_2018() (peridoxia.data_structures.Liquid method) (peridoxia.main.LiquidHistory method) fO2_cont (peridoxia.data_structures.Olivine property) (peridoxia.data_structures.Orthopyroxene property) (peridoxia.data_structures.Spinel property) (peridoxia.main.OlivineHistory property) (peridoxia.main.OrthopyroxeneHistory property) (peridoxia.main.SpinelHistory property) fO2_Hirschmann_2022() (peridoxia.data_structures.Liquid method) (peridoxia.main.LiquidHistory method) fO2_Kress_and_Carmichael_1991() (peridoxia.data_structures.Liquid method) (peridoxia.main.LiquidHistory method) Fo_num (peridoxia.data_structures.Olivine property) (peridoxia.main.OlivineHistory property) G G_cont_to_fO2 (peridoxia.data_structures.Assemblage property) (peridoxia.main.ModelRun property) Garnet (class in peridoxia.data_structures) garnet_project() (in module peridoxia.input_composition) GarnetHistory (class in peridoxia.main) get_all_phase_objects() (peridoxia.data_structures.Assemblage method) get_assemblage_dictionaries() (peridoxia.data_structures.Assemblage method) get_assemblage_from_phase_masses_and_oxides() (peridoxia.data_structures.Assemblage class method) get_data_table() (peridoxia.main.ModelRun method) get_element_mole_array_from_oxides() (peridoxia.data_structures.PhaseDictionaries method) get_element_moles() (in module peridoxia.data_structures) get_elements_normalized_to_oxygen() (peridoxia.data_structures.PhaseDictionaries method) get_endmember_mass_from_endmember_mol() (peridoxia.data_structures.Assemblage method) get_endmember_mol_from_endmember_mass() (peridoxia.data_structures.Assemblage class method) get_garnet_endmember_fractions() (peridoxia.data_structures.PhaseDictionaries method) get_liquid_endmember_fractions() (peridoxia.data_structures.PhaseDictionaries method) get_normalized_modes() (peridoxia.data_structures.PhaseDictionaries method) get_normalized_oxides() (peridoxia.data_structures.PhaseDictionaries method) get_olivine_endmember_fractions() (peridoxia.data_structures.PhaseDictionaries method) get_oxide_comp_array() (peridoxia.data_structures.PhaseDictionaries method) get_oxide_mole_array_from_oxides() (peridoxia.data_structures.PhaseDictionaries method) get_oxide_moles() (in module peridoxia.data_structures) get_oxide_wt_dict_from_endmember_mol() (peridoxia.data_structures.Assemblage method) get_oxide_wt_from_endmember_mol() (peridoxia.data_structures.Assemblage method) get_phase_dictionaries_from_phase_masses_and_oxides() (peridoxia.data_structures.PhaseDictionaries class method) get_phase_endmember_mol() (peridoxia.data_structures.Assemblage method) get_phase_idx() (peridoxia.data_structures.Assemblage method) get_phase_mass() (peridoxia.data_structures.Assemblage method) get_phase_object() (peridoxia.data_structures.Assemblage method) get_pyroxene_endmember_fractions() (peridoxia.data_structures.PhaseDictionaries method) get_spinel_endmember_fractions() (peridoxia.data_structures.PhaseDictionaries method) get_starting_comp_from_file() (in module peridoxia.input_composition) get_WH05_starting_comp() (in module peridoxia.input_composition) gt (peridoxia.main.ModelRun property) I initial_assemblage (peridoxia.main.ModelRun property) input_arguments (peridoxia.main.ModelRun property) L label (peridoxia.data_structures.Phase property) (peridoxia.main.ModelRun property) liq (peridoxia.main.ModelRun property) Liquid (class in peridoxia.data_structures) LiquidHistory (class in peridoxia.main) load_model_run_from_file() (peridoxia.main.ModelRun class method) logfO2_abs (peridoxia.data_structures.Assemblage property) (peridoxia.main.ModelRun property) logfO2_dFFM (peridoxia.data_structures.Assemblage property) (peridoxia.main.ModelRun property) logfO2_dQFM (peridoxia.data_structures.Assemblage property) (peridoxia.main.ModelRun property) M mass (peridoxia.data_structures.Phase property) (peridoxia.main.PhaseHistory property) Mg_num (peridoxia.data_structures.Phase property) (peridoxia.main.PhaseHistory property) ModelRun (class in peridoxia.main) module peridoxia.data_structures peridoxia.input_composition peridoxia.main peridoxia.plotting_and_saving mol_cat (peridoxia.data_structures.Phase property) (peridoxia.main.PhaseHistory property) N name (peridoxia.main.PhaseHistory property) normalize() (in module peridoxia.data_structures) O Olivine (class in peridoxia.data_structures) OlivineHistory (class in peridoxia.main) olv (peridoxia.main.ModelRun property) opx (peridoxia.main.ModelRun property) Orthopyroxene (class in peridoxia.data_structures) OrthopyroxeneHistory (class in peridoxia.main) ox_dict (peridoxia.data_structures.Phase property) oxide_order (peridoxia.data_structures.Assemblage property) (peridoxia.main.PhaseHistory property) oxides (peridoxia.data_structures.Phase property) (peridoxia.main.PhaseHistory property) P Pbar (peridoxia.main.ModelRun property) peridoxia.data_structures module peridoxia.input_composition module peridoxia.main module peridoxia.plotting_and_saving module PGPa (peridoxia.data_structures.Phase property) (peridoxia.main.ModelRun property) Phase (class in peridoxia.data_structures) phase_names (peridoxia.data_structures.Assemblage property) PhaseDictionaries (class in peridoxia.data_structures) PhaseHistory (class in peridoxia.main) phs_obj_list (peridoxia.main.PhaseHistory property) phs_str (peridoxia.main.PhaseHistory property) plot() (peridoxia.main.ModelRun method) plot_model_runs() (in module peridoxia.plotting_and_saving) pot_TC (peridoxia.main.ModelRun property) pot_TK (peridoxia.main.ModelRun property) Q QFM (peridoxia.data_structures.Assemblage property) (peridoxia.main.ModelRun property) R replace_phase_endmember_mol() (peridoxia.data_structures.Assemblage method) S save_data_table() (peridoxia.main.ModelRun method) Spinel (class in peridoxia.data_structures) SpinelHistory (class in peridoxia.main) spl (peridoxia.main.ModelRun property) sys (peridoxia.main.ModelRun property) System (class in peridoxia.data_structures) SystemHistory (class in peridoxia.main) T TC (peridoxia.data_structures.Phase property) (peridoxia.main.ModelRun property) test_run() (peridoxia.main.ModelRun class method) TK (peridoxia.main.ModelRun property) TK_olv_spl (peridoxia.data_structures.Assemblage property) (peridoxia.main.ModelRun property) Ts_per_6_O (peridoxia.data_structures.Clinopyroxene property) (peridoxia.data_structures.Orthopyroxene property) (peridoxia.main.ClinopyroxeneHistory property) (peridoxia.main.OrthopyroxeneHistory property) X XM1XM2 (peridoxia.data_structures.Orthopyroxene property) (peridoxia.main.OrthopyroxeneHistory property)